What Are the Small Flies in Compost Bins and Are They a Problem?

tiny vinegar fly drosophila often found in compost bins

Many gardeners are familiar with the experience of lifting the lid off a compost bin and seeing a cloud of small flies rise into the air in front of them.

These little flies are vinegar flies or drosophila, and the reason why they’re found in the compost bin or worm farm is because they feed on and breed in rotting fruit and vegetable matter, and their larvae (maggots) feed on micro-organisms. They’re short-lived, with a lifespan of around 50 days.

They can be identified by their bright brick-red eyes and yellow-brown bodies with distinct black rings running across the top of the abdomen, much like on a bee. These features are not easy to see without a magnifying glass as an adult vinegar fly only measures around 3mm (1/8”) in length.

There are around 1,500 different Drosophila species, and one species, Drosophila melanogaster, is extensively used in genetic research. It’s chosen for this purpose because many generations can be produced in a very short period of time. It has a very short life cycle of 8.5 days (and a bit longer in higher temperatures) to develop from an egg into an adult, is easy to breed, and lots of offspring can be produced because the female lays about 100 eggs per day.

Are Drosophila a Fruit Fly?

Even though drosophila are often called small fruit flies, they are not related to the pests known as fruit flies, and they do not cause any harm in the garden.

Drosophila, the genus of flies commonly known as vinegar flies, belong to the family Drosophilidae, and tend to gather around overripe or rotting fruit.

On the other hand, true fruit flies, such as Queensland fruit fly (Bactrocera tryoni) and Mediterranean fruit fly (Ceratitis capitata) belong to the family Tephritidae, which mainly feed on unripe or ripe fruit, making them highly destructive agricultural pests.

There’s an exception from the Drosophila genus that’s worth mentioning. It has been reported in the US that the spotted wing drosophila or cherry vinegar fly (Drosophila suzukii), an invasive vinegar fly species from Asia, has made its way into that country. The larvae of Drosophila suzukii can also feed on fresh fruit and can sometimes be a pest. They can attacks more than 100 different fruit crops, including cherries, blackberries, blueberries and grapes.

How do you distinguish Drosophila suzukii from other Drosophila species?

Drosophila suzukii male identifying characteristics:

  1. Light yellow or brown fly with red eyes.
  2. Dark spot on leading edge of the wing near the tip, centred on the first major wing vein
  3. Markings consist of bands at the ends of abdominal segments, bands are unbroken.
  4. Front feet with two combs each. Combs with 3-6 teeth. Teeth of combs parallel to the length of the foot.

Drosophila suzukii female identifying characteristics:

  1. Light yellow or brown fly with red to red-brown eyes.
  2. Large, hardened, saw-like ovipositor with dark teeth.
  3. Markings consist of bands at the ends of abdominal segments, bands are unbroken.
  4. No dark areas around wing veins.
  5. No combs on front feet.
  6. Smaller than 1/8” or 4mm.

How to Control Vinegar Flies in Compost Bins

tiny vinegar fly drosophila often found in compost bins
The tiny vinegar fly, of the Drosophila genus, is often found in compost bins

Vinegar flies are totally harmless, but can become annoying when their populations grow to very large numbers.

To minimise their numbers, here are some actions that you can take:

  • Keep a lid on compost buckets that are used to hold fruit and vegetable scraps destined for the compost bin or worm farm.
  • Don’t place rotting fruit on the surface of a compost pile, bury it in the compost so the females can’t lay their eggs in it and breed up in big numbers.

On the bright side, the nuisance factor of these little flies can serve as a reminder to clean up any fallen fruit, which will attract them when it becomes overripe or starts rotting.

Good garden hygiene isn’t the only reason to collect fallen fruit, because if unripe or ripe fruit falls and is left there, it can become a breeding site for the real fruit flies, which are insidious pests, so keep your garden clean!

More articles on Garden Pests, Diseases and Problems


  • Zurqui All-Diptera Biodiversity Inventory – How to Identify Flies – Cyclorrhapha
  • U.S. Department of Agriculture, National Invasive Species Information Center – Spotted Wing Drosophila
  • Linford NJ, Bilgir C, Ro J, Pletcher SD. Measurement of lifespan in Drosophila melanogaster. J Vis Exp. 2013;(71):50068. Published 2013 Jan 7. doi:10.3791/50068
  • Oregon Department of Agriculture – Identifying Drosophila suzukii, October 7, 2013 by Josh Vlach

6 thoughts on “What Are the Small Flies in Compost Bins and Are They a Problem?

  1. I let the flies do their thing, as we also see lots of bats here doing their thing too. That makes me think to get the bat detector out of an evening. Thanks for reminding me.

    1. I also leave the vinegar flies alone to do their thing, they probably serve as food for a lot of other insects too. So great to have bats around, we get big flying fox bats in the neighbor’s giant fig tree in summer.

    1. I think they’re called vinegar flies because they’re attracted to rotting fruit, when it rots it goes sour and has that vinegar-like smell, which I would guess is probably also acidic.

  2. Thanks for the info, I’ve just built my compost bin and initially it attracted more flies than I was happy with, but with a good layer of browns and keeping some of the kitchen scraps buried helped a lot. Now I try to always do some layering, even if small, to avoid having swarms going there. The bin is made out of left over wood and is far from closed, but I keep a lid on to avoid excess rain water or crows. I will see if I can get some of them to check their details, I honestly never looked too close, this summer I saw an unusual volume of flies here, and they are big, are those fruit flies? There are many cherries in the area and their fruits usually go to waste in lawns or birds eat them. Despite that, I’m not sure what could be attracting them (it’s before my bin, so I know it’s not my fault).

Leave a Reply